# Repertoire: residues
# Frequencies Filter: true
# Print Homology: true
# Print Ruler: true
# Number of Columns: 286
# Number of Sequences: 6
# Status: 0
# Threshold to Show Word: 0.01
# Threshold to Uppercase Word: 0.9
# Width: 80
# Word Size: 1
# Word Classes Count: 28
# Word Class[0]: "A"
# Word Class[1]: "B"
# Word Class[2]: "C"
# Word Class[3]: "D"
# Word Class[4]: "E"
# Word Class[5]: "F"
# Word Class[6]: "G"
# Word Class[7]: "H"
# Word Class[8]: "I"
# Word Class[9]: "J"
# Word Class[10]: "K"
# Word Class[11]: "L"
# Word Class[12]: "M"
# Word Class[13]: "N"
# Word Class[14]: "O"
# Word Class[15]: "P"
# Word Class[16]: "Q"
# Word Class[17]: "R"
# Word Class[18]: "S"
# Word Class[19]: "T"
# Word Class[20]: "U"
# Word Class[21]: "V"
# Word Class[22]: "W"
# Word Class[23]: "X"
# Word Class[24]: "Y"
# Word Class[25]: "Z"
# Word Class[26]: "*"
# Word Class[27]: "-"
# Used Command: -c 1 -f 0.010000 -i /pbil/db/bcl2db/workdir/MB2VsDTNn9sfl0R/data/GenerateBCL2Dataset_bB7KKoA0KSte/data/proteins/fasta/BCP/Metazoa/CLASSBH3/Dipodomys-ordii_CLASSBH3.clu -l -r -t 2 -z 0.900000 -s 0


D         10        20        30        40        50        60        70        80
S ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
H                        .   .                                  *   * .      .    
R -----------mekqpsdvsseedreggtqrgs-------eq-------------------gPglrPtaqtslqtetqs-
R ivpgemeppqcvaeled--fqacsgspsqlqplllsatlfarsqldcplsrlqlfplthccp qpc gspldkahqqlgp
R            ------fe---qeeas vtpdafiktl y--                   m s   apgelpi spm-n
R             fqi e  p  m d   ad          q                              fgd    qg

D         90       100       110       120       130       140       150       160
S ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
H                                                                 :               
R ----------------------------------------------------------psspvpmscgvttqpps-----
R astsrshhggrgpvgtrsrpssypaspgpfetrsplfifvrrssllsrsssgyfsfdterqgamlpgdkssetqrppyqs
R ppg pege dacaqespqghlap  gmeedagl                         devws fr rsrenqvnlfcga
R le                                                          e d  d leg a  a     

D        170       180       190       200       210       220       230       240
S ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
H                         :.        *  :.*::                                    :.
R ----l---a-----q--p---r-evw----iareLrrigDefdryy-----p--------tqahqqpqmviwgqlryiir
R fnyy-slp-smrqs-qp-egl-v-lqaarr--qk qcma qmhalhrsprr-rrvglnnyqared-hrdralrlvllflh
R aghr pam gfpaa ee adh p i     yg-- v  s    qslkglplaqspftatq-----y------------m 
R                                            grf      kla m ihsl lt s  gv  v  rl  

D        250       260       270       280      
S ....:....|....:....|....:....|....:....|....:.
H                                               
R nva--r-----wrpr-------------------------------
R ll-ln-enrdragmhnprrqvspsqvrrqmlpavlllcgalqlllq
R qssswtriirs wdpilglgsa g                      
R g  hl ahfqa