Dataset for CDS herpesviridae of organism all

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
atgaacctggccattgctctggactctcctcacccaggcctcgcgtcttatactattctgccacgcccattttatcatat
   g   g       a         t  a                                                   
                                                                                
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                  * *                                           
----------------------------------ATGgc-----------ctaTtcaacaA--ggGagaTacTgttagcc
aagcctgaagcccgtgagctggcctgacgagacc c aggccagcctttgaagactgcagcttctttat-tg------ag
                 a                   tatgagtttggcatc-caa-gttgaa-ccgtccga agagc--
                                     ctcatc  g    --c--gt g  gga  cc  -t  cgta a
                                         gt       g    -c    cc       c-   c   t

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ctgtgtatacgg---------------Gacag---------ccgtGtgcatggAaat-----------------------
gaccccggtgaacactgctgcggcgtg-gtctcgccctcgctgcccgatgaca-ggaggctgagtccatctgctacctca
--------g-t tttc ggt   gagaa-g--gtttaaatt taaaat tc--c--cttgaataaaac g aac ttgat
agt t tact-       cc     ac  -tatca t gc  -t t c c t  c -ac g                ctc
t   a   -a                   ag  a  g t                  c  c                   

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----gg--------tgcccTgcAt--cCtGTGTtggagCtaGc------------AGcAaGAgaaacacctc----ccg
tgttcacccctattagattacctc-cagtgactgccaccggg-atgaccatggccggaaggtgcctg-ctt--cagt---
cacga--        atgat aa-gg t a gc-gattatcta-ga           ttc-------t---ct   cttt
 t  tta        cc  g  g aa a    a -t  taa  gcc            g ca t gtg ga      aac
                      -           a                         t  a               a

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
cctttc-ccagaggacactgT------------------gGttCTgcgttatcatGtgttgcttgA------ggaGataa
------g-----accagaccctgatgacggccggaagagaagcgcctac-----c-gcgcat-ca-ggcctcccta-agg
ggcgctagtcat-ttt-tgtaca    aac         t a-tgag-gataaggtatcatgggtcaattctatgcggcc
 agc att t gc-g-c-a-                      g a a - gc  -c-aag  a - tc gaatac cctt
  a  gc      a gt -a                                    c             g         

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ttgaAcgaaatt--ca----GagacatTtgcagacacttggaccagatt-----tataAca-------cacaccG---aa
aacggtaggcagctg-ttac-cagagccgaactgacggacagagg----aaagg-----tgccccgtct----tatcc--
cgatcatt tgcggaggcggtttt-tgaat-gccg--cgt  ta cgcc     ctcctat       ggagt  gggtg
 c c g   gcatatc  cta  cg-      att a  a   t tca      gga ggc       atg       gt
             c           c          t         t        c             c        c 

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                         *                      
cat-tg-------GacCtgga------------------tttttAaCtca------gTatt-----tgtaGagatatTtc
---g--cccatcg-gg-aaagacacgcacgtacggctca-caccggtgtccttgggc gcgaattcctcgt------cgt
gcctg    tcaaa-aag tccaggaggtccgtacaaatg gggtc a-g    act  gc     acat gagataac-
ag c           t   ctggtat caaatgtttcgc         gt      a  -      gagc  t gcg -a
               -         c t t c c  g                      a              cgc a 

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
accgtGgagACccaagccttggGcgcgcgtTggcctggaTGgcctggT--------gcatgcatgcctgcaggacatTGT
--aaccacc-ttacgagtacta-tcgcgac-cagggtaggtctgatcccgcttttc------------at-cagtggcag
tg---  -ac---t-c------ ---t--- ---t-a-c-aa t ctg    a   ctcccacgatac gg---a--  a
ctgca  g-g gt-t-a g ac a a-tt  aca-c-c-  t a aa         aatgat at  a -ct t-tc   
g t g       gg  t c  t   taa   tt aa                       a   c     ata  gc    

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
gttgtaaccag--tactccttacTatGttgtggacCtgtcAgttcGtggga------------TG-ttagaagccagcga
-----------tc---------tcgc-gc-c-a-at---ttcc-g------gaaaaccgctaag-accgcgg--------
acgtggcatctcactt ttggca  aac-t-t-gg acga-t-g-accaagccgcgggaggtt-tg--ct-tattgcttc
  aaa  gg  a   g   cc     t ga  t t caa- - ct aacc  gc  aa a  g  ta -- -t   t a 
       ta  g       a      c  c      g c  a aa  t              c                 

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-------------------------agGcctgGa----tgg-----ttGGattcatc------aacagggcggcTGGtCt
gacatctttacgagagccactgtccgaatgcccccttcgtataagccccagggttatcgcccact------acggaacgc
a g aga  gaa  cat  ta    tc at tt gcgtaa-     aa ctccgcggattttcggggactt-at---atg
                             a aa agcg -c     -   c---gc- aagatt-t ttagt--   - a
                                  taa  ct         -   --    ag - a cac  ta      

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
actt------------------TaattaaagacaacattcctgGctcca--gaaggtttag----ctggactttgtTtct
tgaatcgcagactctggtaagg-tgcggggctgggag-------aatgccaaggtcgc-gagacgt------caaccctc
gtgcctatctcaatct c    cgcgccttagaccgcgcttcca----gtc-ctata-a--tcac-attttgaccg-g-g
c-cg g g ctgcgg  g    acta t  --t--t-ca ggattcaa-agt--c-- ctta taag cg a- t- -g 
  --                           c- t-t g aatc      tc  -              c     a    

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
tGctgga----Ctgactttgagtctgttagttatat----TaGttattt-atttatctccagaggaagacacTAA-----
catgacgtggggcc----------------------gttccgcccggcctgaccgatct-ctgaa-tctttg-ggttcca
g  ctt catc-aaggggaagcgg tgccaggg g a   gctaaccgagcgggtgg--t-----g------c--     
a  a a  tc  --c  ag ttct  c   c         -  gg- a a  a c aagggcttttgtgaca        
            g t  c        a                             -   t cccc    g         

       
....:..
       
-------
atcctaa
       
       
       
© 1998-2019