Dataset for CDS herpesviridae of organism Epstein Barr virus

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
atgaacctggccattgctctggactctcctcacccaggcctcgcgtcttatactattctgccacgcccattttatcatat
       g       a         t  a                                                   
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                  ***       *  *    **     * ** ****          * 
----------------------------------ATG------GCCtAtTCaACaagggAGATaCTGT---------tAg
aagcctgaagcccgtgagctggcctgacgagacc   aggccaa ta gagt  ----- t  t    gtttgtgagg c
                 a                       a    c                g            a   
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*** **  *  ** *   **** *     *         ** * * *  *         ** * ** *** *  * ** *
CCCtGTgtAtaCGgGacaGTCGtGtgCatG---------GAaAtGGTgcC---------CTgCaTCcTGTgTtgGaGCtA
   g  cg gg  t --g    c ccatc ccgccggac  c a c ag tgagtccag  a c  a   - ca g  c 
                                         t g   tt                               
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                       ****   ** *     * ***  ****    * **      ****      * ** *
g----------------CaGcAaGAGAAAcACCTctccGCCTTTcgCCAGaggaCaCTGtagtTCTGC---gTtATCAtG
tgtacgcggtgttcaccagtggt    ctg  t ----a g   -a    ---- c  agtccg    cggcnc n  a 
    t         g    a         a  a  c t                                        
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     * *****      **     ** **                         *  ** *   **    **   ** *
tgtTgCtTGAGG------AGatAatTGaACG-----------------------aAatTCaGaGaCAtttACAgaaACtT
gccnc c     aaggat  gaggc  t  acggagctggcctgcaggacagccg ca  g gtg  aagt  cgc  g 
                     g          a  c                     g                      
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        *                       *** **   *    **   **** *      ***   *     *   *
ggaaCagATt--------------tatAacacACAcCGAaCAtttgGAC--CTGGaTtttaaCTCAGtaTttTtaGagaT
acggatct catcagcgtcctgcgcgcggtgt   a  gca cgac  tta    - cgcggt   agg ggg-- ctg 
                a        t  tg        ct   a                              t     
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  * *** **** *          ** ** *        ****  ** **     ** *   ***     *   * *** 
atTtCACcGTGGaGacccaagccTTG-GGcGCGcgttggCCTGGATGgCCtggtgCAtGcatGCCtg-agGaCaTtGTGt
gc a   a    t --------tg  c  t taaaacta    ac  a  ----a  a agc   --c-- cgt c   c
              r   c  a                               g     t       tt  g c      
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*     *      * *  ***       *** ***                       * * ** **   **** * *  
TGtaacCAgTctaCtCctTACtatgttgTGGaCCTgtcagttcgtgggatgttagaagCcAgCGaAGgC-CTGGaTgGtt
 tgggg caga-g c ac   c------   c   ----------------------- t t  c  aat    t t cg
 c        gc                                                         c          
 a                                                                              

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 *  *        *** ***  * * * **   *   * *   *                  **   *  *** * *   
gGatTcatcaacaGGGCGGCtgGtCtAcATtaaTtgaAGACaaCAttcctggatccagaagGTTtagCtgGACtTtGttt
a gc --------   t   at c a g  cgc --g a tgt t----------------t  ccc gt   g g gcc
                       a                            c a     ac    t          a  
                                                                                

       730       740       750       760       770       780         
....:....|....:....|....:....|....:....|....:....|....:....|....:....
** **  * *****  *** *   * *  * * ** *                                
CTtGCtgGaCTGACttTGAgTctgTtAgtTaTaTGTAgttatttatttatctccagaggaagacactaa
  g  ca c     --   c tcc g aa c t  c a-------------------------------
  c                         g                                  g   
                                                                     
© 1998-2019